Planteome: Term Details for "retrotransposon silencing by RNA-directed DNA methylation" (GO:0141010)

Notice

Some functionality on this page depends on JavaScript. To fully use the features of AmiGO 2, enable JavaScript in your browser and reload from the landing page.

Term Information

Accession: GO:0141010
Name: retrotransposon silencing by RNA-directed DNA methylation
Ontology: biological_process
Synonyms: retrostransposon silencing by RdDM
Alternate IDs: None
Definition: A retrotransposon silencing mechanism mediated by RNA-directed DNA methylation. RNA-directed DNA methylation is a gene silencing process in which small interfering RNAs (siRNAs) guide DNA methylation to the siRNA-generating genomic loci and other loci that are homologous to the siRNAs for de novo DNA methylation. This results in a heterochromatin assembly, a chromatin conformation that is refractory to transcription. Source: PMID:32719317, PMID:32381626, PMID:36570931, PMID:28633017
Comment: None
History: See term history for GO:0141010 at QuickGO
Subset: None
Related: Link to all annotated objects annotated to retrotransposon silencing by RNA-directed DNA methylation.; Link to all direct and indirect annotations to retrotransposon silencing by RNA-directed DNA methylation.; Link to all direct and indirect annotations download (limited to first 10,000) for retrotransposon silencing by RNA-directed DNA methylation.
Feedback: Comments, changes to terms, or requests for new ontology terms can be made at GO issue tracker on GitHub.

Filter results

Viewing options

GO:0009987 cellular process
GO:0071840 cellular component organization or biogenesis
GO:0016043 cellular component organization
GO:0008150 biological_process
BFO:0000001 entity
GO:0008152 metabolic process
BFO:0000003 occurrent
GO:0043933 protein-containing complex organization
GO:0050789 regulation of biological process
GO:0043170 macromolecule metabolic process
GO:0048519 negative regulation of biological process
GO:0071704 organic substance metabolic process
GO:0071824 protein-DNA complex organization
GO:0019222 regulation of metabolic process
GO:0065007 biological regulation
GO:0006325 chromatin organization
GO:0006338 chromatin remodeling
GO:0010467 gene expression
GO:0009892 negative regulation of metabolic process
BFO:0000015 process
GO:0010468 regulation of gene expression
GO:0060255 regulation of macromolecule metabolic process
GO:0040029 epigenetic regulation of gene expression
GO:0010629 negative regulation of gene expression
GO:0010605 negative regulation of macromolecule metabolic process
GO:0031507 heterochromatin formation
GO:0070828 heterochromatin organization
GO:0045814 negative regulation of gene expression, epigenetic
GO:0050794 regulation of cellular process
GO:0032196 transposition
GO:0140718 facultative heterochromatin formation
GO:0048523 negative regulation of cellular process
GO:0031047 regulatory ncRNA-mediated gene silencing
GO:0032197 retrotransposition
GO:0006346 DNA methylation-dependent heterochromatin formation
GO:0031048 regulatory ncRNA-mediated heterochromatin formation
GO:0010526 retrotransposon silencing
GO:0080188 gene silencing by RNA-directed DNA methylation
GO:0141005 retrotransposon silencing by heterochromatin formation
GO:0141010 retrotransposon silencing by RNA-directed DNA methylation

Parents of retrotransposon silencing by RNA-directed DNA methylation (GO:0141010)

subject	relation	object
retrotransposon silencing by RNA-directed DNA methylation	is_a	gene silencing by RNA-directed DNA methylation (GO:0080188)
retrotransposon silencing by RNA-directed DNA methylation	is_a	retrotransposon silencing by heterochromatin formation (GO:0141005)

This term has no children.

retrotransposon silencing by RNA-directed DNA methylation

Term Information

Filter results

Viewing options

Parents of retrotransposon silencing by RNA-directed DNA methylation (GO:0141010)

None.