Planteome: Term Details for "bacterial-type EF-P lysine modification" (GO:0072580)

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Term Information

Accession: GO:0072580
Name: bacterial-type EF-P lysine modification
Ontology: biological_process
Synonyms: EF-P modification pathway
Alternate IDs: None
Definition: The modification of a lysine residue in a protein to produce (2S)-2-amino-6-([(3S)-3,6-diaminohexanoyl]amino)hexanoic acid, and the subsequent hydroxylation of the modified lysine residue. This modification is observed in, and is probably unique to, the prokaryotic translation elongation factor P (EF-P). Source: GOC:curators, RESID:AA0530, RESID:AA0531, GOC:mah, PMID:20729861, PMID:22706199, GOC:imk
Comment: The EF-P modification pathway is now thought to be composed of three steps: conversion of alpha-lysyl-EF-P to beta-lysyl-EF-P, lysylation of Lys34, and hydroxylation of Lys34.
History: See term history for GO:0072580 at QuickGO
Subset: gocheck_do_not_annotate
Related: Link to all annotated objects annotated to bacterial-type EF-P lysine modification.; Link to all direct and indirect annotations to bacterial-type EF-P lysine modification.; Link to all direct and indirect annotations download (limited to first 10,000) for bacterial-type EF-P lysine modification.
Feedback: Comments, changes to terms, or requests for new ontology terms can be made at GO issue tracker on GitHub.

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BFO:0000001 entity
BFO:0000003 occurrent
BFO:0000015 process
GO:0008150 biological_process
GO:0008152 metabolic process
GO:0006807 nitrogen compound metabolic process
GO:0071704 organic substance metabolic process
GO:0043170 macromolecule metabolic process
GO:1901564 organonitrogen compound metabolic process
GO:0044238 primary metabolic process
GO:0043412 macromolecule modification
GO:0019538 protein metabolic process
GO:0036211 protein modification process
GO:0018193 peptidyl-amino acid modification
GO:0018205 peptidyl-lysine modification
GO:0072580 bacterial-type EF-P lysine modification
GO:1901260 peptidyl-lysine hydroxylation involved in bacterial-type EF-P lysine modification
GO:0071915 protein-lysine lysylation
GO:0072581 protein-N6-(L-lysyl)-L-lysine modification to protein-N6-(beta-lysyl)-L-lysine

Parents of bacterial-type EF-P lysine modification (GO:0072580)

subject	relation	object
bacterial-type EF-P lysine modification	is_a	peptidyl-lysine modification (GO:0018205)

Children of bacterial-type EF-P lysine modification (GO:0072580)

subject	relation	object
protein-lysine lysylation (GO:0071915)	BFO:0000050	bacterial-type EF-P lysine modification
peptidyl-lysine hydroxylation involved in bacterial-type EF-P lysine modification (GO:1901260)	BFO:0000050	bacterial-type EF-P lysine modification
protein-N6-(L-lysyl)-L-lysine modification to protein-N6-(beta-lysyl)-L-lysine (GO:0072581)	BFO:0000050	bacterial-type EF-P lysine modification

bacterial-type EF-P lysine modification

Term Information

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Parents of bacterial-type EF-P lysine modification (GO:0072580)

Children of bacterial-type EF-P lysine modification (GO:0072580)

None.