Term Information

Accession
GO:0000978
Name
RNA polymerase II cis-regulatory region sequence-specific DNA binding
Ontology
molecular_function
Synonyms
RNA polymerase II core promoter proximal region sequence-specific DNA binding, RNA polymerase II distal enhancer sequence-specific DNA binding, RNA polymerase II promoter proximal region sequence-specific DNA binding, RNA polymerase II proximal promoter sequence-specific DNA binding, RNA polymerase II upstream activating sequence (UAS) sequence-specific DNA binding
Alternate IDs
GO:0000980
Definition
Binding to a specific upstream regulatory DNA sequence (transcription factor recognition sequence or binding site) located in cis relative to the transcription start site (i.e., on the same strand of DNA) of a gene transcribed by RNA polymerase II. Source: GOC:txnOH-2018
Comment
Note that the phrase "upstream activating sequence", or UAS is often used in S. cerevisiae literature to refer to cis-regulatory sequences. In bacteria such as E. coli, the phrase "upstream activating sequence", or UAS is usually a synonym for "enhancer".
History
See term history for GO:0000978 at QuickGO
Subset
None
Feedback
Comments, changes to terms, or requests for new ontology terms can be made at GO issue tracker on GitHub.

Filter results

Loading...
pending...
Parents of RNA polymerase II cis-regulatory region sequence-specific DNA binding (GO:0000978)
subject[Reorder by subject] relation[Reorder by relation] object[Reorder by object]
RNA polymerase II cis-regulatory region sequence-specific DNA binding [is_a relation] is_a  RNA polymerase II transcription regulatory region sequence-specific DNA binding (GO:0000977)
RNA polymerase II cis-regulatory region sequence-specific DNA binding [is_a relation] is_a  cis-regulatory region sequence-specific DNA binding (GO:0000987)
Children of RNA polymerase II cis-regulatory region sequence-specific DNA binding (GO:0000978)
subject[Reorder by subject] relation[Reorder by relation] object[Reorder by object]
retinoic acid-responsive element binding (GO:0044323) [is_a relation] is_a  RNA polymerase II cis-regulatory region sequence-specific DNA binding
N-box binding (GO:0071820) [is_a relation] is_a  RNA polymerase II cis-regulatory region sequence-specific DNA binding
RNA polymerase II cis-regulatory region sequence-specific DNA binding, bending (GO:0044377) [is_a relation] is_a  RNA polymerase II cis-regulatory region sequence-specific DNA binding
sterol response element binding (GO:0032810) [is_a relation] is_a  RNA polymerase II cis-regulatory region sequence-specific DNA binding
vitamin D response element binding (GO:0070644) [is_a relation] is_a  RNA polymerase II cis-regulatory region sequence-specific DNA binding
estrogen response element binding (GO:0034056) [is_a relation] is_a  RNA polymerase II cis-regulatory region sequence-specific DNA binding
E-box binding (GO:0070888) [is_a relation] is_a  RNA polymerase II cis-regulatory region sequence-specific DNA binding
cAMP response element binding (GO:0035497) [is_a relation] is_a  RNA polymerase II cis-regulatory region sequence-specific DNA binding
serum response element binding (GO:0010736) [is_a relation] is_a  RNA polymerase II cis-regulatory region sequence-specific DNA binding
juvenile hormone response element binding (GO:0070594) [is_a relation] is_a  RNA polymerase II cis-regulatory region sequence-specific DNA binding
GC-box binding (GO:0140728) [is_a relation] is_a  RNA polymerase II cis-regulatory region sequence-specific DNA binding
carbohydrate response element binding (GO:0035538) [is_a relation] is_a  RNA polymerase II cis-regulatory region sequence-specific DNA binding
None.